Tristan Stérin*, Abeer Eshra*, Janet Adio, Constantine Evans, Damien Woods2025 (*Joint lead co-authors). [bioarXiv], [bib]
A Thermodynamically Favoured Molecular Computer: Robust, Fast, Renewable, Scalable
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An efficient algorithm to compute the minimum free energy of interacting nucleic acid strands
Ahmed Shalaby, Damien Woods Leibniz International Proceedings in Informatics (LIPIcs). Volume 334, pp. 130:1-130:20.Best paper award 2025 [short proceedings version], [full arXiv version], [bib]
Minimum free energy, partition function and kinetics simulation algorithms for a multistranded scaffolded DNA computer
Minimum free energy, partition function and kinetics simulation algorithms for a multistranded scaffolded DNA computer
Ahmed Shalaby, Chris Thachuk, Damien Woods
DNA29: The 29th International Conference on DNA Computing and Molecular Programming
Schloss Dagstuhl—Leibniz-Zentrum für Informatik LIPIcs:1:1–1:22, 2023
Harvesting Brownian Motion: Zero Energy Computational Sampling
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Funded by the European Union. Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or European Innovation Council and SMEs Executive Agency (EISMEA). Neither the European Union nor the granting authority can be held responsible for them.
